BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E05SP1|AL429408
(983 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig717 1346 0.0
>3x_Contig717
Length = 3533
Score = 1346 bits (677), Expect = 0.0
Identities = 696/701 (99%), Gaps = 1/701 (0%)
Strand = Plus / Minus
Query: 1 aatactaaatcaaactgaaaggttaatttcaatttgattttgagtttgaattataatcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 aatactaaatcaaactgaaaggttaatttcaatttgattttgagtttgaattataatcgt 653
Query: 61 tataattatatcgatcaaaaatcaaatttgtcaagaaaggagataagaaaaaatacagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tataattatatcgatcaaaaatcaaatttgtcaagaaaggagataagaaaaaatacagaa 593
Query: 121 aaaattagttcccagtaagatgcgcctagcagtagaagtaaaacgaaggaattgtagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aaaattagttcccagtaagatgcgcctagcagtagaagtaaaacgaaggaattgtagtac 533
Query: 181 tatccaggatccgtgtcacagctaagcaagggttcttcccgcagttgctattgctacacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tatccaggatccgtgtcacagctaagcaagggttcttcccgcagttgctattgctacacg 473
Query: 241 aggctttgtaaatacattgcataaattatattgtacattacttaaataccctctcttcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aggctttgtaaatacattgcataaattatattgtacattacttaaataccctctcttcat 413
Query: 301 ttatcacttgagtatgtatgtgaaatctacaattcccctgcaagtttaacaagattatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttatcacttgagtatgtatgtgaaatctacaattcccctgcaagtttaacaagattatta 353
Query: 361 gactttctggtttttgttgtgtctgttggtcggtgtagcctgctatgacgtgaagtagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gactttctggtttttgttgtgtctgttggtcggtgtagcctgctatgacgtgaagtagac 293
Query: 421 cgaaaagcaagatcgtgaatatggtttgagcatttatttcgtagttgttgatgcagagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cgaaaagcaagatcgtgaatatggtttgagcatttatttcgtagttgttgatgcagagag 233
Query: 481 aggggtagtggtgggaatcaggccattgcccggtactaaccttgtgtggtgcatgtatgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aggggtagtggtgggaatcaggccattgcccggtactaaccttgtgtggtgcatgtatgc 173
Query: 541 ggtgcaaatatgcaaatctttttttcgggaatgttacccggggggatgatggtgtccacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 ggtgcaaatatgcaaatctttttttcgggaatgttacccggggggatgatggtgtccacg 113
Query: 601 tgactatcacgtggacgttcgttagttttttccaagctctcttcactat-tctctttggg 659
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 112 tgactatcacgtggacgttcattagttttttccaagctctcttcactatatctctttggg 53
Query: 660 atttgtatgtggagggaggacggtgtagctcaatggacaat 700
|||||||||||||||||||||| | ||||| ||||||||||
Sbjct: 52 atttgtatgtggagggaggacgatatagctaaatggacaat 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6513
Number of Sequences: 1807
Number of extensions: 6513
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 983
length of database: 10,358,551
effective HSP length: 16
effective length of query: 967
effective length of database: 10,329,639
effective search space: 9988760913
effective search space used: 9988760913
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)